Changes of the concentrations of COD Mn, BOD5and NH3-N from main sections of the middle and upper reaches of EastRiver were identified, by using the method of seasonal Kendall test for water quality data from Longchuan, Heyuan and Boluomonitoring stations during 2001-2007. The results suggest that: (1) the concentrations of BOD5 increase significantly at all stations;(2) the concentrations of CODMnand NH3-N do not display a significant trend at Longchuan control section, and the concentrationsof CODMn showed a decreasing trend and NH5-N showed an increasing trend at both Heyuan and Boluo control sections; (3) changein the rate of water quality from the middle reaches is larger than that from the upper reaches; (4) the water quality change is mainlyinfluenced by the change of waste discharge.